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9th BigBrain Workshop

HIBALL Closing Symposium

From October 27th to 29th, 2025, we held our 9th annual BigBrain Workshop in Berlin, Germany.

Scroll down to watch the recordings of the event.

Featured

BigBrain Project Educational Lecture

Helen Zhou

Integrating Brain Imaging and AI: Applications in Neurological Disorders

HIBALL Lecture in Brain Analytics and Learning

Andreas Horn

Causal Mapping: From Connectomic Deep Brain Stimulation Toward the 'Human Dysfunctome'

LOC Session: The Berlin Institute of Health, Charité Berlin

Petra Ritter

Introduction: Digital Brain Twins

LOC Session: The Berlin Institute of Health, Charité Berlin

Leon Stefanovski

The Virtual Brain as a Translational Platform: Modeling Diseases from the Molecular Level to Network Dynamics

LOC Session: The Berlin Institute of Health, Charité Berlin

Katy Börner

Human Reference Atlas Construction and Usage

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9th BigBrain Workshop: Celebrating 5 Years of Successful HIBALL Collaboration

Berlin, Germany — The 9th BigBrain Workshop (27–29 October 2025) in Berlin brought together the HIBALL and BigBrain communities to explore the frontiers of ultra-high-resolution, multimodal brain data, modelling, and mapping; to celebrate the successful completion and remarkable achievements of the HIBALL initiative; and to discuss how to maintain momentum and further strengthen the collaboration between European and Canadian neuroscience.

The discussions in Berlin made clear that there is a strong commitment to expanding these scientific connections grown over the years of collaboration in HIBALL. During the project, researchers not only advanced research on data and tools around the BigBrain but also forged digital bridges between research infrastructures — linking Europe’s EBRAINS platform with Canadian initiatives such as HBHL (Healthy Brains, Healthy Lives) and CBRAIN.

Otmar Wiestler, President of Germany’s Helmholtz Association between 2015 and 2025, named HIBALL a prototypical model of successful EU–Canadian collaboration and compellingly argued for the strengthening of such links across the Atlantic in a speech “The World in Motion: Why Transatlantic Scientific Cooperation Matters”.

At its core, the meeting featured a packed programme of scientific presentations and discussions by the research community around the BigBrain model, an ultrahigh-resolution model of the entire human brain that is a part of the EBRAINS multi-level human brain atlas (siibra explorer). With over 100 scientists onsite and 50 online, the topics ranged from fine-scale mappings of neuroanatomical structures in never-before-seen detail, to new mapping tools from neuroinformatics and AI, like HippoMaps, CellDetection, and CytoNet.

Highlights also included the Sievers lecture given by Kâmil Uludağ from the University of Toronto, who showed how computational modelling can improve the precision of neuroimaging; and a keynote on medical applications given by Andreas Horn from the University Hospital of Cologne and Mass Brigham General in Boston. He showed how much millimetres matter when it comes to helping Parkinson’s patients using electrical stimulation of target structures in the brain, so-called Deep Brain Stimulation. Pioneers in the field like him look to brain atlases that offer neuroanatomy of the highest possible resolution.

As always, the event also looked beyond. Helen Zhou from the National University of Singapore gave the Educational lecture of the HBHL training day, which preceded the workshop. Richa Verma from Indian Institute of Technology in Madras presented the DHARANI project, which creates a three-dimensional histological cell atlas of the developing human brain. Katy Börner, Indiana University USA and Visiting Fellow, Stiftung Charité Berlin, showed the HuBMAP Human Reference Atlas (HRA) for the healthy human body. All in all, the program featured speakers from 14 countries, reflecting the growing global network of collaborative brain research around shared digital resources and methods.

“The EU and Canada have ideal conditions for increased cooperation. Now is the time to deepen our ties even more”, said Katrin Amunts. “I look forward to working with all of you on this!” HIBALL co-leader Alan Evans added that "In this era of expanding global scientific cooperation and AI technology, HIBALL is ideally placed to promote the wider participation of the Global South in advanced brain research, the so-called 'democratisation' of neuroscience, so that issues of direct relevance to these regions can be addressed."

Both thanked all participants and this year's local host, the Berlin Institute of Health. The Berlin meeting will be followed up in autumn 2026 with the 10th BigBrain Workshop in Montreal.

9th BigBrain Workshop



Keynote Talks



BigBrain Project Educational Lecture (HBHL Training Day)

Integrating Brain Imaging and AI: Applications in Neurological Disorders

Juan Helen Zhou
Centre for Translational MR Research, National University of Singapore

Sievers Lecture in Computational Neuroscience

From Group Averages to Precision Neuroimaging: Brain Function and Anatomy at the Individual Level

Kâmil Uludağ
Sunnybrook Research Institute, University of Toronto, Canada

HIBALL Lecture in Brain Analytics and Learning

Causal Mapping: From Connectomic Deep Brain Stimulation Toward the 'Human Dysfunctome'

Andreas Horn
Network Stimulation Laboratory at Mass General Brigham Boston & UK Köln, Cologne, Germany



HIBALL Closing Symposium Talks

HIBALL: Intro

Katrin Amunts and Alan Evans
5 Years HIBALL, Where Are We Now

HIBALL: Future

Katrin Amunts and Alan Evans
5 Years HIBALL, Where Are We Going

The World in Motion: Why Transatlantic Scientific Cooperation Matters

Otmar D. Wiestler,
The World in Motion: Why Transatlantic Scientific Cooperation Matters



LOC Session: The Berlin Institute of Health, Charité Berlin

Human Reference Atlas Construction and Usage

Katy Börner
Indiana University and Visiting Fellow, Stiftung Charité)



Invited Talks

Mapping Molecular Patterns in the Brain

Hannah Spitzer
LMU Munich, Germany

Integrating and Interpreting Brain Maps

Bratislav Misic
McGill University, Montréal, Canada

Multimodal Characterization of the Developing Human Brain

Richa Verma
Sudha Gopalakrishnan Brain Centre (SGBC), Indian Institute of Technology Madras

Towards Precision Neuroscience of Healthy and Diseased Human Brains

Boris Bernhardt
McGill University, Montréal, Canada



Contributed Talks

Session 1: Multiscale Data Integration & AI-based Processing



Closing the Gaps: A Multi-Branch Diffusion Model for a Gapless 1-μm BigBrain

Jan-Oliver Kropp
Forschungszentrum Jülich, Germany

A Transatlantic Infrastructure to Share and Process BigBrain Datasets

Bryan Caron
McGill University, Montréal, Canada



Session 2: Mapping & Atlases



HippUnfold v2: Improved Robustness, Detail, and Minimized Distortion

Jordan DeKraker
McGill University, Montréal, Canada



Session 3: Applications & Clinical Translation



Axonal-Based Distributed-Delay Neural Maxx Model: Formulation and Application

Anisleidy Gonzalez-Mitjans
McGill University, Montréal, Canada

Using an Ordinary Differential Equation Model to Separate Rest and Task Signals in fMRI

Amrit Kashyap
Charité-Universitätsmedizin Berlin, Germany

Brain Inference, Movie-Watching Paradigm & Mental Health

Tamires Marcal
McGill University, Montréal, Canada



Session 4: Multimodal Modelling & Brain-inspired AI



Phenotyping Whole-Brain Dynamics with Modality-Agnostic Energy Landscapes and Cohort Embeddings

Julian Kędys
Poznan Supercomputing and Networking Center, Poland



HBHL Training Day Hands-on Sessions



BigBrain Data Processing with CBRAIN

Bryan Caron
NeuroHub, McGill University

Working with Quantitative Cortical Cell Densities Using Siibra

Timo Dickscheid & Sebastian Bludau
Forschungszentrum Jülich

Introduction to DataLad

Adina Wagner & Michael Hanke
Forschungszentrum Jülich

Mapping Cortical Microstructure from In Vivo MRI Using FreeSurfer

Oula Puonti
Danish Research Centre for Magnetic Resonance

9th BigBrain Workshop