Tools

Atelier3D is a visualisation and annotation tool from NRC Computer Vision and Graphics

BrainBrowser is a set of web-based 3D visualization tools primarily used for viewing neurological data, such as MRI scans. The surface viewer was modified by Natacha Beck and Lindsay B Lewis to handle the BigBrain surfaces created by C Lepage, A Altinkaya, and various contributors.

A cross-platform descriptive command-line framework for applications.

Calcul Québec’s supercomputers, located in various universities, are available to researchers from across Quebec and Canada. Our systems total over 80 000 cores in a variety of configurations.

CBRAIN is an infrastructure that connects researchers and data from all walks of science to high performance and cloud computing in an easy to manage, reproducible, and user-friendly manner.

High performance computing

Display is designed to visualize and manipulate three dimensional objects, such as human cortical surfaces and sulcal curves.

Tools and visualization applications on the HBP website.

High resolution scanners from Huron Digital Pathology.

The Jülich Supercomputing Centre (JSC) at Forschungszentrum Jülich enables scientists and engineers to solve highly complex, grand challenges in science and engineering within collaborative infrastructures for both supercomputing and grid technologies.

(Longitudinal Online Research and Imaging System) is a web-based data and project management software for neuroimaging research studies. It is an OPEN SOURCE framework for storing and processing behavioural, clinical, neuroimaging and genetic data.

MicroDraw is a web application to visualise and annotate collaboratively high resolution histology data.

A tutorial on how to visualize the BigBrain in Chimera using the MINC format.

A multiscale integration and simulation platform for brain network computation.